PERSEIDS

PERSEIDS – Personalizing cancer therapy through integrated modeling and decision

Project name: PERSEIDS – Personalizing cancer therapy through integrated modeling and decision

Project code: PERSEIDS

Project timeline: 2016 - 2019

Research group: Intelligent Systems

Objective

Personalised medicine

Project team

S. Vinga (PI)
João Miguel da Costa Sousa
Duarte Valério
Jorge Martins
Susana Margarida da Silva Vieira

Publications

Vicente Cruz Silvestre, Deep learning on chaos game representation of genetic sequences, Jun, 2024
Carolina Paiva Lopes Frazão Cruz, Disease Severity and Genetic Variability in pregnant women with Sickle Cell Disease, Jul, 2024
R. Coletti, ML de Mendonça, S. Vinga, M.B. Lopes, Inferring Diagnostic and Prognostic Gene Expression Signatures Across WHO Glioma Classifications: A Network-Based Approach, Bioinformatics and Biology Insights, 18, 2024
Carolina Peixoto, M.B. Lopes, M. Martins, S. Casimiro, D. Sobral, A.R. Grosso, C. Abreu, A. Mansinho, P. Filipe, P.M.D. Costa, A. Fernandes, P. Borralho, C. Ferreira, J. Malaquias, A. Quintela, S. Kaplan, M. Golkaram, M. Salmans, N. Khan, R. Vijayaraghavan, S. Zhang, T. Pawlowski, J. Godsey, A.L So, L. Liu, L. Costa, S. Vinga, Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization, BMC Bioinformatics, 24, 1, 17, 2023
Matheus de Almeida Orsi e Silva, Temporal Sequences Using Temporal Needleman-Wunsch Algorithm, Nov, 2023
Filipe de Jesus Pereira Ferraz, Comparative analysis of machine learning models for timeseries forecasting of Escherichia coli contamination in Portuguese shellfish production areas, Nov, 2023
ML de Mendonça, R. Coletti, CS. Gonçalves, E.P. Martins, B.M. Costa, S. Vinga, M.B. Lopes, Updating TCGA glioma classification through integration of molecular profiling data following the 2016 and 2021 WHO guidelines., Dec, 2023
Ana Carolina Amaral Peixoto, Computational Biology for Modeling Oncological Omics Data: the way towards personalized medicine, Instituto Superior Técnico, Universidade de Lisboa, Dec, 2022
Joana Pinheiro Neto, Irina Alho, Luís Costa, Sandra Casimiro, Duarte Valério, S. Vinga, Dynamic modeling of bone remodeling, osteolytic metastasis and PK/PD therapy: introducing variable order derivatives as a simplification technique, Journal of Mathematical Biology, 83, 4, 39, 2021